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Home / What an Open Science project does: eNanoMapper deliverables archived on ZENODO

What an Open Science project does: eNanoMapper deliverables archived on ZENODO

eNanoMapper[1] has ended. It was my first EC-funded project as PI. It was great to run a three year Open Science project at this scale. I loved the collaboration with the other partners[2], and like to thank Lucian[3] and Markus[4] for their weekly coordination of the project! Lucian also reflected on the project in this blog post[5]. He describes the successful completion of the project, and we partly thank that to the uptake of ideas, solutions, and approaches[6] by the NanoSafety Cluster[7] (NSC) community. Many thanks to all NSC projects[8], including for example NANoREG[9] who were very early adopters!

Our legacy is substantial, I think. I have blogged about some aspects in the past. The p rojects output includes RRegrs for scanning the regression model space[10], extensions of AMBIT for substances[11], tools on top of the APIs< small>[12], visualizations with JavaScript[13], etc. Things have been done Open Source and you can find many repositories on GitHub[14], and we used Jenkins to autobuild various components[15], and not just source code, but also the eNanoMapper ontology[16]. Several software releases are archived on ZENODO[17], the ontology is available from BioPortal[18], the Ontology Lookup Service[19], and AberOWL[20] (and thanks to the operators for their support to get it properly online!).

Several publications have been published[21], along with many tutorials[22]. On the website you could already access many of the deliverables of the project. And last week all public deliverables are now archived on ZENODO[23] (HT to Lucian):


Next time, I want to see if we can get the deliverables published in, for example, Research Intentions and Outcomes[24] journal.

Finally, I like to thanks everyone else if the Maastricht University team that worked on eNanoMapper: Cristian Munteanu[25], who was my first post-doc, Bart Smeets, Linda Rieswijk[26], Freddie Ehrhart[27], and part-time Nuno Nunes[28] and Lars Eijssen[29]. Without them I could not have completed our deliverables.

References

  1. ^ eNanoMapper (enanomapper.net)
  2. ^ partners (enanomapper.net)
  3. ^ Lucian (www.linkedin.com)
  4. ^ Markus (www.linkedin.com)
  5. ^ this blog post (douglasconnect.com)
  6. ^ uptake of ideas, solutions, and approaches (www.citeulike.org)
  7. ^ NanoSafety Cluster (www.nanosafetycluster.eu)
  8. ^ all NSC p rojects (www.nanosafetycluster.eu)
  9. ^ NANoREG (www.nanoreg.eu)
  10. ^ RRegrs for scanning the regression model space (chem-bla-ics.blogspot.nl)
  11. ^ extensions of AMBIT for substances (chem-bla-ics.blogspot.nl)
  12. ^ tools on top of the APIs (chem-bla-ics.blogspot.nl)
  13. ^ visualizations with JavaScript (chem-bla-ics.blogspot.nl)
  14. ^ many repositories on GitHub (github.com)
  15. ^ Jenkins to autobuild variou s components (chem-bla-ics.blogspot.nl)
  16. ^ the eNanoMapper ontology (bioportal.bioontology.org)
  17. ^ archived on ZENODO (zenodo.org)
  18. ^ BioPortal (bioportal.bioontology.org)
  19. ^ Ontology Lookup Service (www.ebi.ac.uk)
  20. ^ AberOWL (aber-owl.net)
  21. ^ published (www.citeulike.org)
  22. ^ many tutorials (enanomapper.net)
  23. ^ all public deliverables are now archived on ZENODO (zenodo.org)
  24. ^ Research Intentions and Outcomes (riojournal.com)
  25. ^ Cristian Munteanu (twitter.com)
  26. ^ Linda Rieswijk (tools.wmflabs.org)
  27. ^ Freddie Ehrhart (tools.wmflabs.org)
  28. ^ Nuno Nunes (tools.wmflabs.org)
  29. ^ Lars Eijssen (tools.wmflabs.org)
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